User Tools

Site Tools


visual3d:documentation:pipeline:metric_commands:metric_compute_temporal_distance

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
visual3d:documentation:pipeline:metric_commands:metric_compute_temporal_distance [2024/11/15 18:38] wikisysopvisual3d:documentation:pipeline:metric_commands:metric_compute_temporal_distance [2024/11/15 18:52] (current) – [Subject computation using subject name/prefix parameters] wikisysop
Line 11: Line 11:
   * Second, make the other TAG active and set a unique output folder.   * Second, make the other TAG active and set a unique output folder.
  
-==== Pipeline Command ====+===== Pipeline Command =====
  
 Command including default values. Command including default values.
Line 58: Line 58:
 Note that the treadmill direction is new, and is specified as a unit vector. Note that the treadmill direction is new, and is specified as a unit vector.
  
-=== Legacy Treadmill Parameters ===+==== Legacy Treadmill Parameters ====
  
 If the subject is walking in the y-direction of the laboratory the unit vector would be: If the subject is walking in the y-direction of the laboratory the unit vector would be:
Line 73: Line 73:
  
 /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0) /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
-==== Temporal Distance Dialog ====+===== Temporal Distance Dialog =====
  
 |**Version 4 & Earlier:**\\ {{:GaitTemporalDistancePropertiesDlg.gif}}  |**Version 5:**\\ {{:EditTemporalDistancev5.png}}  | |**Version 4 & Earlier:**\\ {{:GaitTemporalDistancePropertiesDlg.gif}}  |**Version 5:**\\ {{:EditTemporalDistancev5.png}}  |
  
-=== Files for computing temporal distances ===+==== Files for computing temporal distances ====
  
-|{{:EditTemporalDistancev5_FILES2.png}}  |- The default command will create average temporal distance values for the ACTIVE files and results can be found in the GLOBAL workspace\\ - **Calculate For Each File:** Calculate average values across entire trial\\ - **Create All Instances:** value for each sequence (multiple values per trial)\\ \\ **NOTE:** To use the Calculate For Each File option, Calculate for Each Trial must be selected as well.  |+|{{:EditTemporalDistancev5_FILES2.png}}  |- The default command will create average temporal distance values for the ACTIVE files and results can be found in the GLOBAL workspace\\ - **Calculate For Each File:** Calculate average values across entire trial\\- **Calculate For All Cmo Globals:** Calculate global average \\ - **Create All Instances:** value for each sequence (multiple values per trial)\\ \\ **NOTE:** To use the Calculate For Each File option, Calculate for Each Trial must be selected as well.  |
  
 |{{:EditTemporalDistancev5_Signal.jpg}}  |- If the user would like to define temporal distance metrics using a signal other than the default signal (such as the proximal end of the foot), the user can select a different signal (such as the heel target).\\ \\ - The height is used to calculate [[Visual3D:Documentation:Pipeline:Metric_Commands:Temporal_Distance_Calculations_for_Gait#Statures.2FSecond|statures/second]]  | |{{:EditTemporalDistancev5_Signal.jpg}}  |- If the user would like to define temporal distance metrics using a signal other than the default signal (such as the proximal end of the foot), the user can select a different signal (such as the heel target).\\ \\ - The height is used to calculate [[Visual3D:Documentation:Pipeline:Metric_Commands:Temporal_Distance_Calculations_for_Gait#Statures.2FSecond|statures/second]]  |
  
-|{{:EditTemporalDistancev5_PROPERTIES.png}}  |- The event labels may be changed to any events desired.\\ \\ - Selecting **Strict Event Label Sequence** will create temporal distance measures for events that occur within a gait cycle. For example Swing Time which occurs between RTO and RHS will only be calculated if the event sequence is RHS+RTO+RHS.\\ \\ - Explanations of the calculations of the temporal distance items can be found [[Visual3D:Documentation:Pipeline:Metric_Commands:Temporal_Distance_Calculations_for_Gait|here]].  |+|{{:EditTemporalDistancev5_PROPERTIES.png}}  |- The event labels may be changed to any events desired.\\ \\ - Selecting **Strict Event Label Sequence** will create temporal distance measures for events that occur within a gait cycle. For example Swing Time which occurs between RTO and RHS will only be calculated if the event sequence is RHS+RTO+RHS.\\- **[SIDE} String Exclude** will exclude event sequences with that event.\\ \\ - Explanations of the calculations of the temporal distance items can be found [[Visual3D:Documentation:Pipeline:Metric_Commands:Temporal_Distance_Calculations_for_Gait|here]].  |
  
 |{{:EditTemporalDistancev5_RANGE.jpg}}  |- **Event Instance:** 0 indicates all instances, 1 indicates the first event sequence\\ \\ - **Exclude Sequence:** Creating an event BAD would exclude the trial during which the event occurred  | |{{:EditTemporalDistancev5_RANGE.jpg}}  |- **Event Instance:** 0 indicates all instances, 1 indicates the first event sequence\\ \\ - **Exclude Sequence:** Creating an event BAD would exclude the trial during which the event occurred  |
Line 91: Line 91:
 |{{:EditTemporalDistancev5_FOLDER.jpg}}  |- The result folder may have any name and will be a subfolder of the METRIC folder.  | |{{:EditTemporalDistancev5_FOLDER.jpg}}  |- The result folder may have any name and will be a subfolder of the METRIC folder.  |
  
-==== Subject computation using subject name/prefix parameters ====+===== Subject computation using subject name/prefix parameters =====
  
-Visual3D is in the process of supporting multiple subjects within the same workspace, and across CMO/Z library workspaces. Older versions of Visual3D will not support the subject prefix extensions of this command.+Visual3D now supports multiple subjects within the same workspace, and across CMO/Z library workspaces. Older versions of Visual3D will not support the subject prefix extensions of this command.
  
 When using a version of Visual3D prior to implementing multisubject support, Visual3D treats each CMO/Z file as a single subject. In this way, the temporal and distance metrics are computed in the CMO/Z GLOBAL for the subject processed within that CMO. In the same manner, when computing the temporal and distance metrics across a library of subjects, each CMO/Z is treated as a single subject and then the subject averages are computed across CMO/Z files and placed into the workspace GLOBAL for the overall mean values across subjects. When using a version of Visual3D prior to implementing multisubject support, Visual3D treats each CMO/Z file as a single subject. In this way, the temporal and distance metrics are computed in the CMO/Z GLOBAL for the subject processed within that CMO. In the same manner, when computing the temporal and distance metrics across a library of subjects, each CMO/Z is treated as a single subject and then the subject averages are computed across CMO/Z files and placed into the workspace GLOBAL for the overall mean values across subjects.
Line 101: Line 101:
 When working across CMO/Z files in the CMO/Z library, multisubject support for this command will treat each subject mean in each CMO/Z file as separate subject averages to be included for calculating the temporal and distance metric averages across all the subjects in the CMO/Z library. When working across CMO/Z files in the CMO/Z library, multisubject support for this command will treat each subject mean in each CMO/Z file as separate subject averages to be included for calculating the temporal and distance metric averages across all the subjects in the CMO/Z library.
  
-==== Temporal Distance Control Data ====+===== Temporal Distance Control Data =====
  
 The following are useful resources for temporal data metrics for Control Data Sets. The following are useful resources for temporal data metrics for Control Data Sets.
visual3d/documentation/pipeline/metric_commands/metric_compute_temporal_distance.1731695905.txt.gz · Last modified: 2024/11/15 18:38 by wikisysop